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Autoimmune diseases

EFO Endpoint Browser PheWeb

AUTOIMMUNE

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

None

0 out of 7 registries used, show all original rules.

0

4. Check minimum number of events

None

0

5. Include endpoints

119770

6. Filter based on genotype QC (FinnGen only)

115447

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

No data for upset plot.

No data for upset table.

Summary Statistics

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-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 115447 75721 39726
Unadjusted period prevalence (%) 26.37 29.74 19.95
Median age at first event (years) 49.32 47.59 52.63

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

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Index endpoint: AUTOIMMUNE – Autoimmune diseases

GWS hits: 156

This endpoint is excluded (different definition than used in FinnGen).