Substance use, excluding alcohol

F5_SUBSNOALCO

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

None

0 out of 7 registries used, show all original rules.

0

4. Check minimum number of events

None

0

5. Include endpoints

8319

6. Filter based on genotype QC (FinnGen only)

7905

Control definitions (FinnGen only)

Control exclude F5_SUBSTANCE

Extra metadata

Level in the ICD hierarchy C
First used in FinnGen datafreeze DF2

Similar endpoints

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List of similar endpoints to Substance use, excluding alcohol based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Similar with more cases:

Venn diagram with a set fully inside an highlighted set Similar with less cases:

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 98359 36314 61289
Only index persons 83970 32300 51670
Unadjusted period prevalence (%)
Whole population 1.46 1.04 1.71
Only index persons 1.67 1.19 1.97
Median age at first event (years)
Whole population 34.02 37.28 32.00
Only index persons 32.54 35.38 30.77

-FinnGen-

Key figures

All Female Male
Number of individuals 7905 3740 4165
Unadjusted period prevalence (%) 1.80 1.47 2.09
Median age at first event (years) 39.89 40.09 39.72

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

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Association

Association between endpoint F5_SUBSNOALCO and mortality.

Females

Parameter HR [95% CI] p-value
F5_SUBSNOALCO 4.069 [3.6, 4.6] < 0.001
Birth year 0.995 [0.99, 1.0] 0.226

During the follow-up period (1.1.1998 — 31.12.2019), 4077 out of 26104 females with F5_SUBSNOALCO died.

Males

Parameter HR [95% CI] p-value
F5_SUBSNOALCO 5.055 [4.51, 5.66] < 0.001
Birth year 0.984 [0.98, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 8442 out of 42072 males with F5_SUBSNOALCO died.

Mortality risk

Mortality risk for people of age

years, who have F5_SUBSNOALCO.

N-year risk Females Males
1 0.455% 0.677%
5 1.947% 4.471%
10 5.294% 12.143%
15 10.551% 21.481%
20 17.583% 34.883%

Relationships between endpoints

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Index endpoint: F5_SUBSNOALCO – Substance use, excluding alcohol

GWS hits: 3

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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